The QEInput object¶
The QEInput
object is a input handler for QE:
from qepy.io import QEInput
qeinput = QEInput()
List of all Methods¶
- class qepy.io.QEInput(filename=None, qe_options={}, **kwargs)[source]¶
Input for QE
Read/write the QE input file. The input qe_options or the return of reading is a dictionary. There are two main types of QE input parameters : namelist and card. In the qe_options, for namelist, the key is always start with '&', and the value is a dictionary. But for card, the key is the first line of the card, and the value is a list of string.
e.g.
qe_options = { '&control' : { 'calculation' : "'scf'", 'nstep' : 50, }, 'k_points automatic' : ['1 1 1 0 0 0'], }
Note
If the type of value of namelist is string(character), the value also need contains with quotes.
- Parameters
filename (str) -- Name of QE input file
qe_options (dict) -- A dictionary with input parameters for QE to generate QE input file.
- iter_lines(fh, sep='!', **kwargs)[source]¶
return the non-comment part of non-empty line
sep is the comment characters. The comment line or empty line will be skip. If the line is mixed, only the front non-comment part will return.
- Parameters
fh (object) -- file handler
sep (str, list or tuple) -- The delimiter string, multiple delimiters can given by a list
- read_card(fh, **kwargs)[source]¶
read the card
The comments lines which start with '#' will be kept. Here assuming if all the characters of first word are alphabet letters and length is greater than 6, this line will be next card.
- Parameters
fh (iter) -- modified file handler
- read_namelist(fh, **kwargs)[source]¶
read the namelist
- Parameters
fh (iter) -- modified file handler
- read_qe_input(filename, **kwargs)[source]¶
read the QE input file
- Parameters
filename (str) -- file name of QE input file
- classmethod update_atoms(atoms, qe_options, prog='pw', **kwargs)[source]¶
update atomic information
- Parameters
atoms (ase.Atoms) -- atoms has all atomic information
qe_options (dict) -- Input parameters of QE
- classmethod update_options(options={}, qe_options={}, **kwargs)[source]¶
update options
Use options to update qe_options
- Parameters
options (dict) -- New options
qe_options (dict) -- QE options
- write_qe_input(filename, atoms=None, basefile=None, qe_options={}, prog='pw', **kwargs)[source]¶
Write the QE input file
- Parameters
filename (str) -- The file name of output file
atoms (ase.Atoms) -- structure information with ase.Atoms
basefile (str) -- If set, will base on this file only update atomic information
qe_options (dict) -- Input parameters of QE